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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs694845 chr11:77579747 T/G INTS4L1 chr7:64601603-64694600:+ 0.62 9.91 3.65E-21 Box Plot
THCA rs6948759 chr7:33095688 T/C FKBP9L chr7:55748767-55780945:- 0.4 7.51 3.01E-13 Box Plot
THCA rs694893 chr11:77563344 C/T INTS4L1 chr7:64601603-64694600:+ 0.43 7.84 2.98E-14 Box Plot
THCA rs695046 chr11:77594354 A/G INTS4L1 chr7:64601603-64694600:+ 0.62 10.17 4.09E-22 Box Plot
THCA rs6951446 chr7:140148495 C/T LOC441455 chr9:99488103-99489749:+ 0.5 6.81 2.87E-11 Box Plot
THCA rs6951584 chr7:33111751 T/C FKBP9L chr7:55748767-55780945:- 0.4 8.96 7.3E-18 Box Plot
THCA rs6954699 chr7:33098805 C/T FKBP9L chr7:55748767-55780945:- 0.41 9.23 8.87E-19 Box Plot
THCA rs6954923 chr7:33098763 G/T FKBP9L chr7:55748767-55780945:- 0.39 8.93 9.43E-18 Box Plot
THCA rs6955792 chr7:33063492 A/G FKBP9L chr7:55748767-55780945:- 0.4 9.02 4.66E-18 Box Plot
THCA rs6956397 chr7:33077537 T/C FKBP9L chr7:55748767-55780945:- 0.4 9.02 4.68E-18 Box Plot
THCA rs6961785 chr7:33057597 C/G FKBP9L chr7:55748767-55780945:- 0.34 7.17 2.84E-12 Box Plot
THCA rs6962593 chr7:140177978 T/C LOC441455 chr9:99488103-99489749:+ 0.46 6.17 1.47E-9 Box Plot
THCA rs6962710 chr7:140147902 C/T LOC441455 chr9:99488103-99489749:+ -0.5 -6.79 3.36E-11 Box Plot
THCA rs6962945 chr7:33058441 A/G FKBP9L chr7:55748767-55780945:- 0.34 7.17 2.84E-12 Box Plot
THCA rs6963738 chr7:140141930 A/G LOC441455 chr9:99488103-99489749:+ 0.49 6.49 2.18E-10 Box Plot